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Lecture 26: Hidden Markov models - The Backwards algorithm

Lecture 26: Hidden Markov models - The Backwards algorithm

Released Wednesday, 27th January 2010
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Lecture 26: Hidden Markov models - The Backwards algorithm

Lecture 26: Hidden Markov models - The Backwards algorithm

Lecture 26: Hidden Markov models - The Backwards algorithm

Lecture 26: Hidden Markov models - The Backwards algorithm

Wednesday, 27th January 2010
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What the Backwards algorithm computes and why we want it.Profile HMMs and their use. Cleaning up some topics in sequence analysis (running out of time); PSI-BLAST and its dangers.

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Fundamental Algorithms in Bioinformatics

This course covers fundamental algorithms for efficient analysis of biological sequences and for building evolutionary trees. This is an undergraduate course focusing on the ideas and concepts behind the most central algorithms in biological sequence analysis. Dynamic Programming, Alignment, Hidden Markov Models, Statistical Analysis are emphasized.

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